<?xml version="1.0" encoding="utf-8" ?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:r="https://r-universe.dev"><channel><title>alepandini.r-universe.dev</title><link>https://alepandini.r-universe.dev</link><description>Recent package updates in alepandini</description><generator>R-universe</generator><image><url>https://github.com/alepandini.png</url><title>R packages by alepandini</title><link>https://alepandini.r-universe.dev</link></image><lastBuildDate>Tue, 25 Aug 2026 15:10:09 GMT</lastBuildDate><item><title>[alepandini] MDaRes 0.0.2</title><author>alessandro.pandini@gmail.com (Alessandro Pandini)</author><description>Analyze molecular dynamics (MD) simulation data using
structural alphabets. Protein local conformations from
molecular simulations are encoded in a compressed string
representation. Residue-level UniProt annotations can be
directly retrieved. Comparative analysis tools are available to
investigate conformational variability, coordinated motions,
and differences between systems (e.g. wild-type vs mutant;
bound vs unbound). Methodological details for the structural
alphabet analysis can be found in Pandini et al. (2013)
&lt;doi:10.1093/bioinformatics/btt326&gt;.</description><link>https://github.com/r-universe/alepandini/actions/runs/36115443506</link><pubDate>Tue, 25 Aug 2026 15:10:09 GMT</pubDate><r:package>MDaRes</r:package><r:version>0.0.2</r:version><r:status>success</r:status><r:repository>https://alepandini.r-universe.dev</r:repository><r:upstream>https://github.com/cran/MDaRes</r:upstream></item></channel></rss>